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		<title>Effect of environmental toxins on GATC methylation in E. coli</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/05/03/effect-of-environmental-toxins-on-gatc-methylation-in-e-coli/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/05/03/effect-of-environmental-toxins-on-gatc-methylation-in-e-coli/#comments</comments>
		<pubDate>Tue, 03 May 2011 16:38:34 +0000</pubDate>
		<dc:creator>ljsteele</dc:creator>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Ecology]]></category>
		<category><![CDATA[Environment/Conservation]]></category>
		<category><![CDATA[Evolution]]></category>
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		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1217</guid>
		<description><![CDATA[With the end of the semester drawing near it is becoming that time again when the results are piling in from research you have been working on all semester. As we speak, the final data collection and analysis is taking place in biochemistry, a team of student researchers are exploring of environmental toxins of DNA [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1217&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>With the end of the semester drawing near it is becoming that time again when the results are piling in from research you have been working on all semester. As we speak, the final data collection and analysis is taking place in biochemistry, a team of student researchers are exploring of environmental toxins of <a title="DNA methylation" href="http://en.wikipedia.org/wiki/DNA_methylation">DNA methylation</a>  in the bacterium <em><a title="E. coli" href="http://en.wikipedia.org/wiki/Escherichia_coli">E. coli</a>.</em><em> <a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/e-coli.jpg"><img class="alignleft size-thumbnail wp-image-1229" title="E. coli" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/e-coli.jpg?w=150&#038;h=124" alt="" width="150" height="124" /></a></em></p>
<p><strong>The Bacterial Genome</strong></p>
<p>Bacteria exist throughout the world and can survive in almost any <a title="Encyclopedia of Marine Mammals" href="http://books.google.com/books?id=2rkHQpToi9sC&amp;pg=PA553&amp;lpg=PA553&amp;dq=benthic+bacteria+climate&amp;source=bl&amp;ots=hDeyIt06ru&amp;sig=dvzld2ObGw0tn6v_54oVoI_Vykw&amp;hl=en&amp;ei=syO7Td3gOIfY0QG8iP2_BQ&amp;sa=X&amp;oi=book_result&amp;ct=result&amp;resnum=10&amp;ved=0CF8Q6AEwCQ#v=onepage&amp;q=benthic%20bacteria%20climate&amp;f=false">climate</a> . Bacteria are unicellular and can consist in a wide range of environments such as a pond all the way to soil.  One unique attribute of the bacterial genome is that it contains <a title="DNA methylation" href="http://en.wikipedia.org/wiki/DNA_methylation">adenine methylation</a> , opposed to mammalian organisms which contain <a title="DNA methylation" href="http://en.wikipedia.org/wiki/DNA_methylation">cytosine methylation</a> at <a href="http://en.wikipedia.org/wiki/CpG_site">GpC islands</a>.  Adenine methylation is when a <a title="Methyl group" href="http://en.wikipedia.org/wiki/Methyl_group">methyl group</a> becomes attached to the adenine nucleotide on the DNA. When a methyl group is donated from <a title="SAM" href="http://en.wikipedia.org/wiki/S-Adenosyl_methionine">SAM</a> to form a covalent attachment, it is made on the adenine which can cause <a title="Steric Effects" href="http://en.wikipedia.org/wiki/Steric_effects">steric hindrance</a> of transcription factors and differential effects of DNA binding proteins, which can contribute to a change in <a title="Gene expression" href="http://en.wikipedia.org/wiki/Gene_expression">gene expression</a>.  In <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1698197/">previous studies</a>  it has been shown when <em>E. coli</em> is exposed to different carbon sources (ie glycerol or glucose).  Some areas of the genome become demethylated.  In the bacteria <em>E.</em> <em>coli </em>almost every adenine (A) in the GATC sequence is methylated.  To block the methyation at the GATC sequence, a protein must be present to inhibit the <a href="http://www.ncbi.nlm.nih.gov/pubmed/1537808">DAM methyltransferase</a> from depositing a methyl group on the adenine.</p>
<p><strong>What does Methylation do?</strong></p>
<p>Adenine methylation has many roles in bacteria. Methylation can effect gene expression, cell cycle, <a title="Virulence" href="http://en.wikipedia.org/wiki/Virulence">virulence</a>, and how proteins interact with the DNA. For the research we are performing, we are concerned with what effect the environment has on changing adenine methylation on the GATC repeats. There are about 20,000 GATC repeats in the <em>E.</em> <em>coli</em> genome and under normal log growth conditions almost every single repeat is methylated. It has been found that when bacterial cells are in a log growth phase there are 6-10 sites which are not methylated. These nonmethylated sites lie up and down stream of promoters of different genes. The lack of methylation may allow DNA binding proteins to modulate their function to allow a functional change in gene expression.</p>
<p><strong>Pollutants and the Genome</strong></p>
<p>In the study we are performing we wanted to see how three classes of chemicals pollutants commonly found in the Midwest affect adenine methylation at the GATC site. We choose three pollutants to represent chemicals that fit into the families of common water pollutants, which are heavy metals, chlorinated compounds and nitrogen rich compounds.<a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/220px-gel_electrophoresis_apparatus1.jpg"><img class="alignright size-thumbnail wp-image-1227" title="Gel electrophoresis" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/220px-gel_electrophoresis_apparatus1.jpg?w=117&#038;h=150" alt="Gel Electrophoresis" width="117" height="150" /></a></p>
<p>The above families of compounds will be compared to samples collected from different areas around the campus of <a title="Marian University" href="http://www.marian.edu/Pages/default.aspx">Marian University, Indianapolis, IN</a>. Supplements will be added to all the samples to generate a rich liquid media that will facilitate bacterial growth.  With 6 different test groups and 2 controls we are going to seek to determine if any of our known compounds or a compound present in our environmental sample has an effect on the methylation.  The determination of methylation can be done by using <a title="Restriction Enzyme Digest" href="http://en.wikipedia.org/wiki/Restriction_enzyme">restriction enzyme diges</a>t with endonuclease selecting specifically for the nonmethylated site.  The enzyme we have chosen was MBO and AVI.  When all the genomic DNA from the bacteria is extracted and digested, then it will be ran on a gel to be imaged to determine if the bands of digested DNA differ depending on the chemicals present during growth.  This is a time efficient way to examine if any changes in methylation levels have occurred.</p>
<p><strong>What Does It All Mean?</strong></p>
<p>For conclusion, the relevance of this study includes a few things.  This study will provide evidence to show if environmental toxins have an effect on bacterial DAM methylation. One role bacteria play in an ecosystem is influencing the flow of nutrients which support plant and algae growth. The results of our proposed study may display that toxins have an effect on methylation patterns which could lead to an increase the mutation rate of the bacteria genome itself.   Destructive mutations may decrease bacterial populations leading to a disruption in the ecosystems nutrient flow, hence disruptions in plant and algae growth with effect additional aquatic and terrestrial organisms.</p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/ecology/'>Ecology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/environmentconservation/'>Environment/Conservation</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/evolution/'>Evolution</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/genetics/'>Genetics</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/health/'>Health</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/marian-university-curriculum/'>Marian University curriculum</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/physiology/'>Physiology</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1217/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1217/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1217/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1217&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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			<media:title type="html">ljsteele</media:title>
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			<media:title type="html">E. coli</media:title>
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			<media:title type="html">Gel electrophoresis</media:title>
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		<title>Mystical &#8220;Catnip&#8221;</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/05/03/mystical-catnip/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/05/03/mystical-catnip/#comments</comments>
		<pubDate>Tue, 03 May 2011 16:32:11 +0000</pubDate>
		<dc:creator>mhostetler099</dc:creator>
				<category><![CDATA[Behavior]]></category>
		<category><![CDATA[Biology]]></category>
		<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Health]]></category>
		<category><![CDATA[Physiology]]></category>

		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1177</guid>
		<description><![CDATA[So what is it about &#8220;catnip&#8221; that makes cats crazy, mosquitoes fly away and at the same time has seemingly no effect on human beings?  In actuality, the better question is what are the distinguishing factors allow different organisms to interpret “catnip’s” chemical signal differently or not at all. The 6th Sense (the vomeronasal organ in cats) It [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1177&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>So what is it about &#8220;catnip&#8221; that makes cats crazy, mosquitoes fly away and at the same time has seemingly no effect on human beings?  In actuality, the better question is what are the distinguishing factors allow different organisms to interpret “catnip’s” chemical signal differently or not at all.</p>
<p><strong>The 6th Sense (the vomeronasal organ in cats)</strong></p>
<p>It is well documented that all mammals posses 5 senses (sight, taste, touch, smell, hearing); BUT could mammals have a 6th sense?! Some scientists would say YES and pinpoint this sense to be related to the mysterious <a href="http://en.wikipedia.org/wiki/Vomeronasal_organ">vomeronasal organ</a> located above the roof of the mouth.  This sensory organ is attributed to sensing chemical signals from other organisms and the environment known as <a href="http://en.wikipedia.org/wiki/Pheromone">pheromones</a>.  The vomeronasal organ is present in most mammals and is considered a chemoreceptor organ which exists as a separate entity than the nasal cavity.  Chemoreceptors detect chemical signals from the organism&#8217;s environment and transduce a physiological response accordingly. <a href="http://chemistry.about.com/od/medicalhealth/a/Nepetalactone-Chemistry.htm">Studies</a> indicate that nepetalactone (the chemical produced by &#8220;catnip&#8221;) is responsible for eliciting a psychosexual response in cats by mimicking a sex pheromone and interacting with the feline vomeronasal organ.  Although human beings and felines are both mammals, they react to the chemical in &#8220;catnip&#8221; much differently than one another.  &#8220;Catnip&#8221; elicits no response in human beings and a rather strong response in felines.  The distinction between these responses can most likely be attributed to a physiological difference in the feline and human sensory system.</p>
<p><strong>The Vomeronasal Organ in Humans</strong></p>
<p><img class="alignleft" src="http://veterinerara.com/wp-content/uploads/2009/08/cats-vomeronasal-organ.jpg" alt="" width="230" height="192" />The function of the vomeronasal organ in human beings is actually quite controversial.  Studies on human embryos have indicated that the vomeronasal organ does correspond to the vomeronasal organ in cats and other mammals.  Although the vomeronasal organ is common in both feline and human species, the organ in humans was thought by scientist to be <a href="http://en.wikipedia.org/wiki/Vestigiality">vestigial</a> (or no longer functioning).  The vestigality of the vomeronasal organ in human beings may explain why humans do not react to chemicals in &#8220;catnip&#8221; however this is an unlikely explanation because <a href="http://www.apa.org/monitor/oct02/pheromones.aspx">studies</a> have shown human beings can react to pheromones.  Another explanation to the differing reactions could potentially be attributed to the physiological differences in the organs themselves (show left).<span style="color:#ff0000;">  </span></p>
<p><strong> So Why are Mosquitoes Repelled?</strong></p>
<p>So why are mosquitoes seemingly repelled by some essential oils extracted from different plants and herbs (including &#8220;catnip&#8221;)?  This question is a little more difficult to answer directly because little is known about insect sensory system.  <a href="http://scienceray.com/biology/zoology/what-mosquitoes-like/">Studies</a> have shown that mosquitoes are more attracted to people with high concentrations of steroids and cholesterol on the surface of the skin.  Mosquitoes are attracted and repelled by certain pheromones.  More than likely, the chemical nepetalactone in &#8220;catnip&#8221; is able to mimic a pheromone that triggers a chemical signal causing the insect to become repelled (acting as an insecticide).</p>
<p><img class="alignleft" src="http://fees-1st.com/wp-content/uploads/2010/11/mosquito.jpg" alt="" width="223" height="205" />It is truly amazing that the same chemical can signal different responses in different organisms.  The responses to chemical signals in the organism&#8217;s environment are evolutionarily beneficial; whether it be to attract a mate or flee from impending danger.  According to a <a href="http://www.npr.org/2011/04/18/135468567/repelling-bugs-with-the-essence-of-grapefruit">news report</a> conducted by NPR the CDC is working on natural repellant consisting of extract from cedar tree.  This substance is completely environmentally friendly and actually acts as an insecticide.  It is able to kill the mosquitoes by blocking receptors on their nerve cells (absent in human beings).  Although the chemical found in &#8221;catnip&#8221; is not known to be an insecticide, the similarity between natural extracts (from &#8221;catnip&#8221; and cedar tree) may certainly explain insects natural repulsion from them.</p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/behavior/'>Behavior</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/health/'>Health</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/physiology/'>Physiology</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1177/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1177/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1177/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1177&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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			<media:title type="html">mhostetler099</media:title>
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		<title>Carbonic Acid: Not Just for Coca-Cola Anymore.</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/04/30/carbonic-acid-not-just-for-coca-cola-anymore/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/04/30/carbonic-acid-not-just-for-coca-cola-anymore/#comments</comments>
		<pubDate>Sat, 30 Apr 2011 21:19:23 +0000</pubDate>
		<dc:creator>tsublett</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Climate Change]]></category>
		<category><![CDATA[Ecology]]></category>
		<category><![CDATA[Environment/Conservation]]></category>
		<category><![CDATA[Policy]]></category>

		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1180</guid>
		<description><![CDATA[We sit at an critical point in time with the looming threat of global warming. The world is being changed, but the exact extent of that change is now coming to fruition. Ocean Acidification is one facet of global change that is not being addressed at the same level as, say global warming. Nevertheless, oceanic acidification [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1180&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<h2><span class="Apple-style-span" style="font-weight:normal;font-size:13px;color:#808080;">We sit at an critical point in time with the looming threat of global warming. The world is being changed, but the exact extent of that change is now coming to fruition. <a title="Ocean Acidification" href="http://plumbot.com/Ocean_acidification" target="_blank"><span style="color:#808080;">Ocean Acidification</span></a> is one facet of global change that is not being addressed at the same level as, say global warming. Nevertheless, oceanic acidification is going to become a global concern in the next twenty years because its effects are very damaging.</span></h2>
<p><strong><span style="color:#808080;">How bad is Ocean Acidification?</span></strong></p>
<p><span style="color:#808080;">Oceanic acidification is not a new phenomenon. According to a February 2009 <a title="Ocean Acidification from CO2 Is Happening Faster Than Thought" href="http://www.scientificamerican.com/article.cfm?id=ocean-acidification" target="_blank"><span style="color:#808080;">article</span></a> in Scientific American:</span></p>
<blockquote><p><span style="color:#808080;">Oceans naturally absorb the greenhouse gas; in fact, they take in roughly one third of the carbon dioxide released into the atmosphere by human activities. When CO<sub>2</sub> dissolves in water, it forms carbonic acid, the same substance found in carbonated beverages. New research now suggests that seawater might be growing acidic more quickly than climate change models have predicted.</span></p></blockquote>
<div id="attachment_1205" class="wp-caption alignleft" style="width: 250px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/800px-woa05_glodap_pd_ph_ayool.png"><img class="size-medium wp-image-1205 " title="Global pH" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/800px-woa05_glodap_pd_ph_ayool.png?w=240&#038;h=164" alt="" width="240" height="164" /></a><p class="wp-caption-text">&quot;Present day&quot; (1990s) sea surface pH</p></div>
<p><span style="color:#808080;">This article explains that the ocean is responsible for the bulk of the work in recycling atmospheric gases. The problem, though, occurs in the rate of carbonic acid formation. &#8220;Research at the University of South Florida has shown that in the 15-year period 1995-2010 alone, acidity has increased 6 percent in the upper 100 meters of the Pacific Ocean from Hawaii to Alaska,&#8221; according to an <a title="Plumbot.com-Ocean Acidification" href="http://plumbot.com/Ocean_acidification#cite_note-2010aug_sciam-25"><span style="color:#808080;">article</span></a> on Ocean Acidification from Plumbot.com<br />
</span></p>
<p><span style="color:#808080;">The carbon cycle is a popular topic today. We talk about emissions and about the amount of CO2 given off by an SUV versus a Prius, but what we do not talk about is how detrimental CO2 can be to oceanic processes. The ocean recycles CO2 by converting it into carbonic acid via the reaction:</span></p>
<p><span style="color:#808080;">CO<sub>2</sub> + H<sub>2</sub>O <img src="http://upload.wikimedia.org/wikipedia/commons/thumb/9/96/Equilibrium.svg/15px-Equilibrium.svg.png" alt="is in equilibrium with" width="15" height="13" /> H<sub>2</sub>CO<sub>3</sub></span></p>
<p><strong><span style="color:#808080;">Is There a Consensus?</span></strong></p>
<div id="attachment_1204" class="wp-caption alignright" style="width: 250px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/800px-co2_pump_hg.png"><img class="size-medium wp-image-1204 " title="Carbon Cycle" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/800px-co2_pump_hg.png?w=240&#038;h=167" alt="" width="240" height="167" /></a><p class="wp-caption-text">Representation of the carbon cycle.</p></div>
<p><span style="color:#808080;">Carbonic acid is not necessarily a bad thing, but concentration influences its danger. I can drink a can of soda and I won&#8217;t see any detrimental effects. The sugar may cause problems, but not to a level of lethality. In the ocean, though, the stakes are higher. According to Jason Hall-Spencer, a researcher at the University of Plymouth, &#8220;Many of the marine species having calcium carbonate based external skeletons, including corals and mollusks, are affected because, as water becomes ever more acidic, calcium carbonate concentrations in the water decrease, leaving them with little resources to build their skeletons on.&#8221; Also, &#8220;Marine ecologist J. <a title="Timothy Wootton" href="http://woottonlab.uchicago.edu/" target="_blank"><span style="color:#808080;">Timothy Wootton of the University of Chicago</span></a>&#8230;and his team </span><span class="Apple-style-span" style="color:#808080;">discovered that the balance of ecosystems shifted: populations of large-shelled <a href="http://www.scientificamerican.com/topic.cfm?id=animals"><span style="color:#808080;">animals</span></a> such as mussels and stalked barnacles dropped, whereas smaller-shelled species and noncalcareous algae (species that lack calcium-based skeletons) became more abundant.&#8221; This trend is also true of herring populations. According to an <a title="Seattle Times-Ocean Acidification" href="http://seattletimes.nwsource.com/html/localnews/2014748297_acidification12m.html"><span style="color:#808080;">article</span></a>in the Seattle Times, &#8220;For example, computer models suggest that, if acidification reduces one type of plankton eaten by herring, herring populations may go down. But if acidification hits a different plankton species, the number of the fish could in fact increase. In another hypothetical scenario, potential declines in invertebrates such as urchins and sea cucumbers might be less than first expected because their predators — sea stars — decline, too.&#8221; Dr. Busch is saying here that the effects of Ocean Acidification are so complex, that it will be difficult to really predict what will be affected.</span></p>
<p><strong><span style="color:#808080;">How Does this Affect Me?</span></strong></p>
<p><span style="color:#808080;">It is clear that, though we would not necessarily be directly affected by ocean acidification, the organisms that feed fish we use commercially could decline, resulting in a detrimental effect on the fishing industry in general. That alone may spark much interest into determining the root cause of oceanic acidification and move individuals into steps geared at remedying this problem. According to Cheryl Logan, in an article from BioScience: &#8220;Changes in ocean chemistry will probably affect marine life in three different ways: (1) decreased carbonate ion concentration could affect the calcification process for calcifying organisms (e.g., corals); (2) lowered pH could affect acid-base regulation, as well as a variety of other physiological processes; and (3) increased dissolved CO<sub>2 </sub>could alter the ability of primary producers to photosynthesize.&#8221;</span></p>
<p><strong><span style="color:#808080;">But I Live in Indiana!</span></strong></p>
<p><span style="color:#808080;">The research that was done here, though it has many implications for the future, does not necessarily focus on the problem of fresh water resources. The ocean, by far, is the largest CO2 sink due to its size, but not much research has really been put into freshwater testing of acidification, other than the testing of acidification by direct dumping. The research that Maria Solis and I performed this year at <a title="Marian University" href="http://www.marian.edu/Pages/default.aspx"><span style="color:#808080;">Marian University</span></a> attempted to test this theory, that freshwater resources would experience the same process of acidification.</span></p>
<p><span style="color:#808080;">Though we did not definitively prove any new groundbreaking theories about acidification, we think that we are on the right track. For us, the ideas about ocean acidification do not hit very close to home in land-locked Indiana, but we know that lakes are commonplace. We wanted to do something that not many have done before, look at natural acidification based on dissolved CO2 compared with chemical dumping.</span></p>
<p><span style="color:#808080;">For our experiment, we wanted to observe the effects of high and low CO2 concentrations on plant growth rate and snail shell formation. When looking at plant growth rate, we hypothesized that the increasing levels of CO2 would increase the growth rate in plants at lower CO2 levels. The rate would increase to a point, until acidification would lead to a decrease in plant metabolic functions. Testing photosynthetic rate, or in our case growth rate, is a good measure of CO2 metabolism. Photosynthesis depends on sunlight and CO2, so increasing the level of substrates would definitely increase the level of metabolism in the plants that we chose to use. We chose to use three types of plants to get a range of growth rates. We used a common aquarium plant, <a title="Egeria Densa" href="http://en.wikipedia.org/wiki/Egeria_densa" target="_blank"><span style="color:#808080;">Egeria densa</span></a>. For a secondary plant species, we chose <a title="Elodea densa" href="http://en.wikipedia.org/wiki/Elodea" target="_blank"><span style="color:#808080;">Elodea densa</span></a>.  Finally, for use as a invasive species control, we chose to use <a title="Vallisneria (eel grass)" href="http://en.wikipedia.org/wiki/Vallisneria" target="_blank"><span style="color:#808080;">Vallisneria</span></a>, a freshwater species of eelgrass. Eelgrass is an invasive species, that according to Gabriel Garche in his article entitled &#8220;Water Acidification Process Reveled by Marine Life,&#8221; &#8220;seagrass exploiting the excess of carbon dioxide seems to be thriving.&#8221; Also, to test the effects of carbonic acid on benthic organisms, we also included mystery snails (a species of <a title="Mystery Snails" href="http://en.wikipedia.org/wiki/Mystery_snails" target="_blank"><span style="color:#808080;">Pomacea bridgesii</span></a>).</span></p>
<div id="attachment_1203" class="wp-caption alignleft" style="width: 310px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/imag0181.jpg"><img class="size-medium wp-image-1203" title="CO2 Experiment, tank" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/imag0181.jpg?w=300&#038;h=200" alt="" width="300" height="200" /></a><p class="wp-caption-text">A direct image of tanks used during our experiment</p></div>
<p><span style="color:#808080;">To establish an effective experiment, we obtained six, ten gallon tanks, into which we placed plants into the first three. We placed around 4-5 snails into each of the six tanks. We wanted to simulate the effects of dissolved CO2, so we placed stone bubblers into four of the tanks, into which we bubbled varying amounts of CO2. For two of the four tanks, we used stone bubblers that had room air bubbled into them. So, in total, we had three tanks with plants, all six with snails, four with CO2, and two with room air bubblers. See Photos below:</span></p>
<p><span style="color:#808080;">We were unable to measure dissolved CO2, so we used <a title="Vernier Website" href="http://www.vernier.com/"><span style="color:#808080;">Vernier</span></a> <a title="Dissolved O2 Sensors" href="http://www.vernier.com/probes/do-bta.html" target="_blank"><span style="color:#808080;">dissolved O2 sensors</span></a> to measure the change in dissolved oxygen as a function of time. Also, we used <a title="pH probes" href="http://www.vernier.com/probes/ph-bta.html" target="_blank"><span style="color:#808080;">pH probes</span></a> to measure the change in acidity as a function of time. To measure photosynthetic rate, or rather metabolic rate, we measured all plants prior to experiment starting time, to develop a before-and-after measurement that would confirm growth rate. Also, we weighed all snails as a function of tank, measuring all by mass and volume to determine shell growth  rate. These measurements gave us a benchmark from which we would determine the level of growth as a function of tank. The experiment was carried out for several days.</span></p>
<div id="attachment_1208" class="wp-caption alignleft" style="width: 250px"><span style="color:#808080;"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/imag01831.jpg"><span style="color:#808080;"><img class="size-medium wp-image-1208 " title="Low CO2 (Snails and Plants)" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/imag01831.jpg?w=240&#038;h=160" alt="" width="240" height="160" /></span></a></span><p class="wp-caption-text">Low CO2 (Snails and Plants)</p></div>
<p><span style="color:#808080;">Unfortunately, due to time constraints. We were unable to conclude much from the experiment itself. </span></p>
<p><span style="color:#808080;">Due to the fact that the water we used was fresh water, the pH sensors, based on their configuration for measuring ions, did not register much of a pH change. We will need to find a better method for measuring pH in non-alkaline solutions. An interesting effect we observed was in the snail populations. We observed that all snails in the high CO2 environments died, most likely due to the lack of oxygen. This result was not in keeping with our hypothesis of reduced shell growth, but does speak to the effects of a high CO2 environment on snails. The snails in the tank with low CO2 and no plants died as well. We saw some die in the tank with low CO2 that included plants, but not all died. This seems to indicate that the plants in the tank were able to utilize enough of the CO2 as to provide the snails with oxygen. The tanks with air bubbled in showed all living snails. </span></p>
<p><span style="color:#808080;">The dissolved O2 sensors were sporadic at best. They needed water movement to best determine the dissolved O2. We ran out of CO2 early in the experiment, so without movement, our sensors were unable to register consistent measurements of dissolved O2. We will, in the future use bigger CO2 tanks to get a more prolonged test, so that our O2 sensors may become more effective in giving us detailed results. We also observed plant growth in all tanks. So, we were not successfully able to quantitatively determine what we set out to determine, i.e. pH and dissolved O2, the death of our snails and the growth of our plants gave us a qualitative result that demonstrated that the plants grew in this environment, but that the snails were unable to thrive.</span></p>
<p><span style="color:#808080;">The experiment, if it could be carried out for a longer period of time, would likely demonstrate a trend. This trend would show that the tanks that had high CO2 bubbled into it with plants would show a slower trend of dissolved O2 trending toward a higher CO2 rate. The plants would show growth at a rate higher than the control tank that had room air bubbled into it. The snails would probably not show much change in size, but would most likely thrive better in the tanks that contained the plants that had room air bubbled into. The rate of CO2 bubbling would need to be scaled back, so that our snails would have a chance to thrive in the high CO2 tanks. That way we would be able to measure relative growth rates based on mass and volumetric displacement. The high CO2 tank that contained snails that had no plants would most likely show death of snails, if no growth rate at all.</span></p>
<p><span style="color:#808080;">With these results, we would prove that acidification of freshwater can occur, but most likely not to the level observed in the ocean. This is due to a lack of calcium carbonate in the water itself, a molecule that interacts with CO2 to form carbonic acid.</span></p>
<p><span style="color:#808080;">With an understanding of the crisis that awaits us if CO2 is continually added to the water supply, we must begin to take steps to mediate acidification. One way to do this is to stop adding more CO2, allowing the algae and other CO2 metabolizing organisms to work to reduce the oceanic concentration. Hopefully, with the boom in growth rate that would be observed, the rate of acidification can be slowed to a degree that would diminish detrimental effects. Only time will tell if acidification of both the ocean and freshwater resources will be as detrimental as projected, or if mankind can do something about it. This crisis will affect all of us, if not directly. We need to think and act now.</span></p>
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		<title>An &#8216;Amazing Race&#8217; of the Senses</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/04/29/an-amazing-race-of-the-senses/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/04/29/an-amazing-race-of-the-senses/#comments</comments>
		<pubDate>Fri, 29 Apr 2011 19:18:07 +0000</pubDate>
		<dc:creator>abueno526</dc:creator>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[Fun]]></category>
		<category><![CDATA[Physiology]]></category>

		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1165</guid>
		<description><![CDATA[The last team to check in may be eliminated&#8230; The Amazing Race is a reality tv show in which pairs of contestants race around the world in a challenge of wits, strengths, and abilities to try to ultimately come in first place and win the coveted million dollar prize and of course, bragging rights.  Throughout its 18 seasons [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1165&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><strong>The last team to check in may be eliminated&#8230;</strong></p>
<p><a href="http://www.cbs.com/primetime/amazing_race/">The Amazing Race</a> is a reality tv show in which pairs of contestants race <img class="alignright" style="margin:10px;" src="http://www.tvsa.co.za/mastershowimages/127_amazing_race_468.jpg" alt="" width="158" height="101" />around the world in a challenge of wits, strengths, and abilities to try to ultimately come in first place and win the coveted million dollar prize and of course, bragging rights.  Throughout its <a href="http://en.wikipedia.org/wiki/The_Amazing_Race_(U.S._TV_series)">18 seasons</a> in the United States, contestants have been put through a wide array of challenges, including participating in an acrobatic act, carrying furniture and grains across the city, and identifying a correct tune being played in a sea of pianos.</p>
<p><strong>Tea anyone?</strong></p>
<p><img class="size-full wp-image-1185 alignleft" style="margin-left:10px;margin-right:10px;" title="luke" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/luke.jpg?w=460" alt=""   /></p>
<p>In a specific <a href="http://www.youtube.com/watch?v=WZEdSfuKOTg">episode this season</a>, the contestants were required to drink a cup of papaya mango tea in a small shop in China. Later on that day, they had to pick out that same flavor of tea from a table of hundreds and hundreds of different cups of tea by recognizing the smell and taste. Although a daunting task, all of the teams successfully completed the challenge by identifying the tea.  But, with so many scents and flavors on the table, how were they able to identify the correct cup?</p>
<div class="mceTemp">
<p><strong>Olfaction &#8211; Odorants </strong></p>
<p>All things considered, humans have the ability to recognize and distinguish 7,000 to 10,000 different smells.  But how is this possible?  The first thing to consider is the human capability to detect <a href="http://en.wikipedia.org/wiki/Aroma_compound">odorants</a>, which are typically small organic molecules with some amount of volatility so they can be carried in a vapor from to the nose.  These small odorant molecules are actually detected by their shape, not from any other physical properties that they exhibit.  This means that the different smells come from the way the molecule interacts <a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/carvone_svg.png"><img class="alignleft size-thumbnail wp-image-1181" style="margin:10px;" title="Carvone_svg" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/carvone_svg.png?w=150&#038;h=103" alt="" width="150" height="103" /></a>with the binding site it is associated with.  A common example to better explain this idea can be seen in the molecule carvone (depicted left), which has distinct R and S configurations.  Although the two are mirror images of one another, the R conformation has a scent of <a href="http://en.wikipedia.org/wiki/Mentha_spicata">spearmint</a>, while the S configuration of <a href="http://en.wikipedia.org/wiki/Caraway">caraway</a>, indicating their difference in binding.</p>
<p><strong>Olfaction &#8211; Odorant Receptors</strong></p>
<p>Scents are detected in the main <span style="color:#ff0000;"><a href="http://medical-dictionary.thefreedictionary.com/olfactory+epithelium">olfactory epithelium </a> </span>of the nose, and are are identified by one <a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/epithelium_olfactory.jpg"><img class="alignright size-full wp-image-1191" title="epithelium_olfactory" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/epithelium_olfactory.jpg?w=460" alt=""   /></a>of the million sensory neurons that dwell there, which all contain cilia with receptors.  Although we are able to recognize upward of 7,000 distinct scents, humans only have 350 <a href="http://nobelprize.org/nobel_prizes/medicine/laureates/2004/press.html">odorant receptors </a> As seen in the picture to the right,molecules bind to the receptors that are on the cilia, nerve impulses are generated from the binding and travel through the neurons, and finally move to the <a href="http://en.wikipedia.org/wiki/Olfactory_bulb">olfactory bulb</a>.  Throughout this process (binding to olfactory bulb response), <a href="http://courses.washington.edu/conj/gprotein/cyclicamp.htm">cAMP</a> and <a href="http://en.wikipedia.org/wiki/Guanosine_triphosphate">GTP</a> levels in the body increase, meaning that the process uses <a href="http://en.wikipedia.org/wiki/G_protein-coupled_receptor">7TM receptors</a>.  These compounds are released in a cascade process, depicted to the left.  When the odorant binds to the receptor, a G protein is activated and binds to</p>
<p><img class="alignleft size-medium wp-image-1190" style="margin-left:10px;margin-right:10px;" title="ch32f5" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/ch32f5.jpg?w=300&#038;h=132" alt="" width="300" height="132" />GTP.  This complex then moves to activate an adenylate cyclase, which increases cAMP levels.  High cAMP levels activate and open ion channels, which creates an action potential and allows the smell of an odor to come through.</p>
</div>
<p><strong>Olfaction &#8211; Scent Recognition </strong></p>
<p>But with only 350 distinct receptors, how are we able to detect thousands of smells?  The answer lies in the fact that most smells are composed of several odorant receptors, which can be activated at different levels of odorant.  In other words, there is not a one to one relationship for odorant to receptor, but instead odorants can activate multiple receptors and receptors can be activated by multiple odorants.  As an example, the odorant C6COOH activates six different receptors, while C5OH, C6OH, and C7OH all activate the same receptor.</p>
<p><strong>Olfaction gone awry </strong></p>
<p>Sometimes, we are unable to detect some scents, called a <a href="http://ddr.nal.usda.gov/bitstream/10113/1845/1/IND43831799.pdf">specific anosmia</a>.  although everything seems to be functioning normally, certain compounds are not detected by these individuals, indicating that it it a genetic inheritance of a mutation.  Although over 80 have been identified, some examples of molecules that are unable to be smelled include isobutyric acid, which is responsible for the  <a href="http://books.google.com/books?id=D9-s23_1u8gC&amp;pg=PA225&amp;lpg=PA225&amp;dq=butyric+acid+sweat+specific+anosmia&amp;source=bl&amp;ots=0bF8h21Klf&amp;sig=y5g1LyjgjAYdIvYFEhq11lNvl-s&amp;hl=en&amp;ei=guKxTbmaG8Pt0gG78rm-Ag&amp;sa=X&amp;oi=book_result&amp;ct=result&amp;resnum=1&amp;ved=0CBUQ6AEwAA#v=onepage&amp;q=butyric%20acid%20sweat%20specific%20anosmia&amp;f=false">smell of sweat</a>, and <a href="http://en.wikipedia.org/wiki/Butanethiol">n-Butyl mercaptan</a>, the smell that skunks give off.</p>
<p><strong>Gustation &#8211; An Overview</strong></p>
<p>The tongue has the ability to recognize 5 major tastes in the mouth: bitter, sweet, salty,sour, and umami (savory).  A diagram of where these individual taste buds are located can be found to the right, excluding the umami taste.  <a href="http://en.bab.la/dictionary/english-japanese/umami">&#8220;Umami&#8221;</a> is a word derived from the Japanese language, and includes the tastes of glutamate and aspartate.  Much less is known about this taste than the others because this &#8220;savory&#8221; flavor has only been distinguished from the others within</p>
<p><img class="size-full wp-image-1172 alignright" title="tastebud" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/tastebud.gif?w=460" alt=""   /></p>
<p>the past five to seven years.  Receptors for tastants are more commonly referred to as taste buds, which are made up of about 150 cells.  <a href="http://en.wikipedia.org/wiki/Microvillus">Microvilli</a> on the surface of the tongue bind to tastants and send an impulse through the sensory neurons to the brain to identify the specific taste.  The tastes use different methods to detect the taste, all of which are outlined below.</p>
<p><strong>Gustation &#8211; Salty and Sour</strong></p>
<p>Salty and sour tastes opperate in a similar manner in the fact that they both utilize ion channel interactions.  In the case of salty flavors, this is done through sodium ion and their corresponding amiloride sensitive <a href="http://ajpregu.physiology.org/content/273/6/R1923.full.pdf">Na+ channels</a>.  Sodium ions pass through the channels on the front of the tongue creating a current, amiloride attempts to block this current, and a salty flavor can be tasted.  Similarly, the sour taste acts through a <a href="http://www.pnas.org/content/107/51/21955.extract">hydrogen ion channel </a>.  Hydrogen ions flow through the pores on the sides of the tongue, and a sour taste is observed.</p>
<p><strong>Gustation &#8211; Sweet and Bitter </strong></p>
<p>Unlike the salty and sour tastes, both the sweet and bitter receptors utilize a 7TM receptor complex, as mentioned above in the olfaction discussion.  Because of this, they respond to a larger range of stimulants.  <a href="http://www.elmhurst.edu/~chm/vchembook/549receptor.html">Sweet receptors</a> typically respond to glucose, sucrose, aspartame, saccharine, and even some proteins.  While being researched, scientists discovered that these compounds interact with the T1R1, T1R2, and T1R3 receptors in different combinations with one another.  They all pick of variations of sweetness, with the <a href="http://www.ncbi.nlm.nih.gov/pubmed/19158407">T1R2 and T1R3</a> receptor being the most sensitive to the sugary taste and the T1R1 receptor by itself being the least sensitive to the taste.  The <a href="http://www.hhmi.org/news/zuker.html">bitter receptor</a> acts in a similar manner, however, its receptors respond to toxic alkaloids.  TR2 receptors are responsible for this taste, which is typically recognized at the back of the tongue.  In this regard, it should be noted that taste receptors are much less selective than the scent receptors due to sheer number (350 vs. 5).  For example, in the case of the bitter taste, we usually recognize just bitter in general and are unable to distinguish one bitter compound from another.</p>
<p><strong>Gustation &#8211; Umami </strong></p>
<p>The final taste is <a href="http://chemse.oxfordjournals.org/content/27/9/843.full">umami</a>, which is recognized as the savory flavoring and utilizes 7TM receptors as well.  These receptors respond to <a href="http://www.nature.com/neuro/press_release/nn0200.html">glutamete, aspartate, and even MSG</a>.  It is similar to the sweet receptor in the fact that it utilizes the T1R3 receptor, but it is also paired with the T1R1 receptor.  Unlike the sweet receptor that may utilize different combinations of the receptor, the savory flavor can only be obtained with activation of both the <a href="http://www.ncbi.nlm.nih.gov/pubmed/21422378">T1R3 and T1R1</a> receptors simultaneously.</p>
<p><strong>A Complimentary Combination </strong></p>
<p>So, through a combination of the senses, contestants were able to identify the correct cup of tea.  Using the odorant receptors to bind to the scent molecules and the specific taste buds on the tongue to identify the tastes, it is possible to identify a particular item in a sea of many.  As a tip for the contestants for next time, they may want to rely on their nose more than taste due to the high specificity of the olfaction system!</p>
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		<pubDate>Tue, 05 Apr 2011 14:51:24 +0000</pubDate>
		<dc:creator>Dr. O</dc:creator>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[Ecology]]></category>
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		<description><![CDATA[Congrats to Marian University&#8217;s very own, Cassie Freestone! Check out her spread (click on picture to expand) in the Spring 2011 issue of Marian University&#8217;s magazine, The Magnet. &#160; &#160; &#160; Filed under: Biology, Ecology, Environment/Conservation, Institute for Green &#38; Sustainable Science (IGSS), Marian University curriculum, Physiology, Science Education<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1151&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Congrats to Marian University&#8217;s very own, Cassie Freestone! Check out her spread (click on picture to expand) in the Spring 2011 issue of Marian University&#8217;s magazine, <em>The Magnet.<br />
</em></p>
<p>&nbsp;</p>
<div id="attachment_1161" class="wp-caption alignleft" style="width: 250px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/04/mu_freestone_cassie_8x10-hires.jpg"><img class="size-medium wp-image-1161" title="Cassandra &quot;Cassie&quot; Freestone.  Senior Biology Major at Marian University" src="http://marianuniversityscienceblog.files.wordpress.com/2011/04/mu_freestone_cassie_8x10-hires.jpg?w=240&#038;h=300" alt="" width="240" height="300" /></a><p class="wp-caption-text">Cassie Freestone has participated in numerous independent research endeavors at Marian University from a rigorous summer research course at the Institute for Green &amp; Sustainable Science, to taking independent research credits. Her research experience has given her the toolkit to attract and succeed in internship opportunities like this international marine research study. </p></div>
<p>&nbsp;</p>
<p>&nbsp;</p>
<p><em><br />
</em></p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/ecology/'>Ecology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/environmentconservation/'>Environment/Conservation</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/institute-for-green-sustainable-science-igss/'>Institute for Green &amp; Sustainable Science (IGSS)</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/marian-university-curriculum/'>Marian University curriculum</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/physiology/'>Physiology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/science-education/'>Science Education</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1151/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1151/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1151/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1151&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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		<title>Crazy for &#8220;Catnip&#8221;</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/03/14/crazy-for-catnip/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/03/14/crazy-for-catnip/#comments</comments>
		<pubDate>Mon, 14 Mar 2011 13:32:27 +0000</pubDate>
		<dc:creator>mhostetler099</dc:creator>
				<category><![CDATA[Behavior]]></category>
		<category><![CDATA[Biology]]></category>
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		<description><![CDATA[&#8220;Catnip,&#8221; a feline favorite, is a perennial herb in the mint family Nepeta cataria, more commonly known as “Catnip” is a perennial herb that belongs to the mint family.  This herb packs a powerful punch to cats by provoking a state of euphoria usually lasting several minutes (video).   Many times herbs are utilized for medicinal [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1064&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><strong><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/03/nepetalactone_chemical_structure1.png"><br />
</a>&#8220;Catnip,&#8221; a feline favorite, is a perennial herb in the mint family</strong></p>
<p><em><a href="http://en.wikipedia.org/wiki/Nepeta_cataria">Nepeta cataria</a></em>, more commonly known as “Catnip” is a perennial herb that belongs to the mint family.  This herb packs a powerful punch to cats by provoking a state of euphoria usually lasting several minutes (<a title="Cats behavior while influenced by catnip" href="http://www.youtube.com/watch?v=J5Xrcp6k8VE" target="_blank">video</a>).   Many times herbs are utilized for <a href="http://www.bryansk.ru/ginseng/index2.htm">medicinal purposes</a> , but “catnip” obviously doesn’t affect human beings in the same way that it does cats.  What is it about “catnip” that provokes a euphoric response in cats but not in human beings?</p>
<p><strong><strong><strong><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/03/nepetalactone_chemical_structure1.png"><img class="alignleft" title="Nepetalactone chemical structure" src="http://marianuniversityscienceblog.files.wordpress.com/2011/03/nepetalactone_chemical_structure1.png?w=178&#038;h=210" alt="" width="178" height="210" /></a>The </strong></strong>chemical component responsible for the effects of catnip</strong></p>
<p><a href="http://chemistry.about.com/od/medicalhealth/a/Nepetalactone-Chemistry.htm" target="_blank">Studies</a> suggests that the chemical <a href="http://en.wikipedia.org/wiki/Nepetalactone">nepetalactone</a> found in “catnip” is primarily responsible for triggering the <a href="http://www.newscientist.com/article/mg18825192.900-just-a-nip.html">response</a> in cats.  Nepetalactone evokes a psychosexual response in both male and female cats by mimicking a <a href="http://cheapcatfurniture.net/how-does-catnip-affect-felines.htm">sex pheromone found in cat urine</a>.</p>
<p><strong>Bugs aren&#8217;t so crazy for &#8220;catnip&#8221;</strong></p>
<p>The chemical nepetalactone may attract felines, but does quite the opposite to some insects.  <a href="http://www.ag.iastate.edu/aginfo/news/2001releases/catnip.html">Researc</a><a href="http://www.ag.iastate.edu/aginfo/news/2001releases/catnip.html">h</a><a href="http://www.ag.iastate.edu/aginfo/news/2001releases/catnip.html">ers at Iowa State University</a> found that the chemical nepetalactone is a successful repellent of mosquitoes, flies, and cockroaches.  Particularly, the research team at Iowa State found that a solution of catnip extract is comparable in effectiveness to a ten times more concentrated solution of <a href="http://www.atsdr.cdc.gov/consultations/deet/health-effects.html">DEET</a>.  Research in finding alternatives to repellents or pesticides, such as DEET, is very important because chemicals contained in most pesticides pose a serious threat to human health and the environment.  Unfortunately, the essential oils in “catnip” are extremely <a href="http://dictionary.reference.com/browse/volatile" target="_blank">volatile</a><span style="color:#ff0000;"> </span>and have a potent, but short lived repelling effect.  Further research in reducing its volatility is essential before such repellents can be used by the general public.</p>
<p><strong>Catnip&#8217;s properties are multifunctional</strong></p>
<p>Interestingly, researchers at the <a href="http://www.mpg.de/en">Max-Planck Society</a> found that birds that used different types <a href="http://www.herbcompanion.com/health/herbal-starling-nest.aspx">herbal plants in their nests</a> produced offspring that were less prone to infestation of mites.  This study indicates that other herbs may have the same insect-repelling power as “catnip&#8221; and that organisms other than humans are using this characteristic to their benefit.</p>
<p><span style="color:#ff0000;"><img class="alignleft" title="Cat attracted to catnip plant" src="http://www.treehugger.com/cat-at-catnip-photo.jpg" alt="" width="161" height="203" /><br />
</span></p>
<p>In the future, the active ingredient, nepetalactone, may be found in the bottle of repellent you spray on yourself or the pesticide you sprinkle on your plants.  You can be sure that the product you are using is much safer than the products of old, but if you have cats you must beware!  Such products will still provoke the same euphoric response caused by “catnip” sold in pet stores.</p>
<div><span style="color:#ff0000;"><strong><br />
</strong></span></div>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/behavior/'>Behavior</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/fun/'>Fun</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/health/'>Health</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/uncategorized/'>Uncategorized</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1064/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1064/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1064/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1064&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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			<media:title type="html">Nepetalactone chemical structure</media:title>
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		<title>Survivor? Or Starvation?</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/03/04/survivor-or-starvation/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/03/04/survivor-or-starvation/#comments</comments>
		<pubDate>Fri, 04 Mar 2011 22:03:09 +0000</pubDate>
		<dc:creator>abueno526</dc:creator>
				<category><![CDATA[Biology]]></category>
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		<description><![CDATA[Outwit. Outplay. Outlast. Survivor. A show with the motto above,  “Outwit, Outplay, Outlast.” Contestants are put on a deserted island with meager food, shelter, and comforts to compete in a series of challenges as they try to become the &#8216;Sole Survivor&#8221;.  Although the glory of winning the title is great, what is physically happening to contestants’ bodies as [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1086&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><strong>Outwit. Outplay. Outlast.</strong></p>
<p><img class="alignright size-thumbnail wp-image-1087" title="survivor-22" src="http://marianuniversityscienceblog.files.wordpress.com/2011/02/survivor-22.jpg?w=150&#038;h=97" alt="" width="150" height="97" /></p>
<p><a href="http://www.cbs.com/primetime/survivor/">Survivor</a>. A show with the motto above,  “Outwit, Outplay, Outlast.” Contestants are put on a deserted island with meager food, shelter, and comforts to compete in a series of challenges as they try to become the &#8216;Sole Survivor&#8221;.  Although the glory of winning the title is great, what is physically happening to contestants’ bodies as they put themselves under these extreme conditions?  Some, like <a href="http://www.tvsquad.com/2009/10/22/survivor-samoa-russell-swan-injured/">Russell Swan</a> from Survivor:Samoa, get fatigued earlier than others, having to be removed from the game for medical reasons.  When this shut down occurs, what is happening?  How far can they really be pushed until they move into a starvation-like mode?</p>
<p><strong>How does it all start?</strong></p>
<p>Typically, <a href="http://en.wikipedia.org/wiki/Glucose">glucose</a> is the major energy provider to the body.  Fats can be a precursor to glucose, and ample amounts of them in the body lead to proper function and metabolism.  When one is in starvation mode, the liver is the first to <a href="http://d3jonline.tripod.com/13-Metabolism_and_Nutrition/Metabolic_Response_to_Starvation.htm">sense this</a>.  Because the body is unable to convert fats into glucose, it biochemically makes a shift to harness more of its energy from <a href="http://www.coconutketones.com/pdfs/owens_ketones_as_fuel_for_brain_during_starvation_2005.pdf">ketone bodies</a> in order to save the muscles from deterioration via protein breakdown.</p>
<p><strong>And the downward spiral begins</strong></p>
<p>This switch to the use of ketone bodies is also vital to supplying energy to the brain cells, which is a top metabolic focus for the body no matter its state. In this protection mode, and use of a new fuel source by the brain, blood glucose levels drop dramatically.  This way of living will continue until all fatty acid energy stores have been used up.  Metabolic function will switch from using ketone bodies to its last</p>
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<dt class="wp-caption-dt"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/03/starvation.png"><img class="size-medium wp-image-1109" title="Starvation" src="http://marianuniversityscienceblog.files.wordpress.com/2011/03/starvation.png?w=300&#038;h=290" alt="" width="300" height="290" /></a></dt>
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<p>resort of proteins for energy.  Final stages of starvation such as these can result in <a href="http://www.medicinenet.com/arrhythmia_irregular_heartbeat/article.htm">heart arrhythmia,</a> <a href="http://www.mayoclinic.com/health/liver-failure/DS00961">liver failure </a>, and a<span style="color:#ff0000;"> <a href="http://en.wikipedia.org/wiki/Muscle_atrophy">discontinuation of muscle functioning</a></span>, ultimately leading to <a href="http://www.scientificamerican.com/article.cfm?id=how-long-can-a-person-sur">death</a>.</p>
<p><strong>What would you do for a million dollars? </strong></p>
<p>So, when a Sole Survivor is picked at the end of 39 days, what sort of condition are they in?  Although perhaps a few sizes smaller, the contestants will not have reached a true starvation mode due to the time frame of the show and availability of some food for nourishment.  Although they can do it, it&#8217;s definitely not recommended unless you&#8217;re playing for the <a href="http://popwatch.ew.com/2010/12/19/survivor-nicaragua-finale-winner/">million dollar prize!</a></p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/nutrition/'>Nutrition</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1086/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1086/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1086/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1086&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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		<title>Cramming: A Student&#8217;s Best Friend?</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/03/04/cramming-a-students-best-friend/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/03/04/cramming-a-students-best-friend/#comments</comments>
		<pubDate>Fri, 04 Mar 2011 18:30:30 +0000</pubDate>
		<dc:creator>ljsteele</dc:creator>
				<category><![CDATA[Behavior]]></category>
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		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1097</guid>
		<description><![CDATA[The night flies by&#8230; As a senior undergraduate student, slowly over the past four years I have realized the importance of cramming before a test. Simply put, by this stage in my academic career, it has become routine to stay up all night before a test to study.  In classes where there are multiple choice [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1097&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><span style="color:#000000;"><strong>The night flies by&#8230;</strong></span></p>
<p><span style="color:#000000;">As a senior undergraduate student, slowly over the past four years I have realized the importance of cramming before a test. Simply put, by this stage in my academic career, it has become routine to stay up all night before a test to study.  In classes where there are multiple choice tests, it appears to be easier to stay up all night cramming, as is the belief that if you at least can recognize the question, ruling out the different choices for the answer becomes quite simple.  It has been shown that </span><a title="Exploring Cramming" href="//jmd.sagepub.com/content/30/3/226.short?rss=1&amp;ssource=mfc&gt;"><span style="color:#000000;">over a third of students</span></a><span style="color:#000000;"> cram the night before a test.</span></p>
<p><span style="color:#000000;"><strong>Equal Justice?</strong></span></p>
<p><span style="color:#000000;">However, although many students utilize the practice of cramming, whether or not it helps students is up for debate. There are </span><a href="//jmd.sagepub.com/content/30/3/226.short?rss=1&amp;ssource=mfc&gt;"><span style="color:#000000;">different levels of cramming</span></a><span style="color:#000000;">, and each appear to cause different results when it comes to grades and GPA.  The issue that is starting to be seen is that although cramming may help in terms of short term memory, the <a href="http://jmd.sagepub.com/content/30/3/226.full.pdf+html">retention of that information</a> weeks after the course ends seems to be up in the air.  Of course, when cramming is being utilized, it only makes sense that the information storage would be contained in the </span><a href="http://en.wikipedia.org/wiki/Frontal_lobe"><span style="color:#000000;">f</span></a><a href="http://en.wikipedia.org/wiki/Frontal_lobe"><span style="color:#000000;">rontal lobe of the brain</span></a><span style="color:#000000;">, while long term memory, which would be associated with studying that has taken place over numerous days or weeks, would be stored over multiple parts of the brain.</span></p>
<div id="attachment_1099" class="wp-caption alignright" style="width: 160px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/03/level04frontallobe.jpg"><span style="color:#000000;"><img class="size-thumbnail wp-image-1099" title="Frontal Lobe" src="http://marianuniversityscienceblog.files.wordpress.com/2011/03/level04frontallobe.jpg?w=150&#038;h=150" alt="" width="150" height="150" /></span></a><p class="wp-caption-text">Green highlighted area represents the frontal lobe of the brain</p></div>
<p><span style="color:#000000;">Many different </span><a title="Illini paper" href="http://www.dailyillini.com/news/campus/2009/05/08/cramming-before-finals-can-be-bad-for-health"><span style="color:#000000;">universities</span></a><span style="color:#000000;"> have brought to light the health implications that one may bring upon him or herself when cramming. But, it is also shown that certain periods of acute stress are positive for the human body, which cramming would appear to fall under the category of <a href="http://stress.about.com/od/stressmanagementglossary/g/accutestress.htm">acute stress</a>. During acute stress, the body increases its <a href="http://en.wikipedia.org/wiki/Fight-or-flight_response">fight or flight respons</a><a href="http://en.wikipedia.org/wiki/Fight-or-flight_response">e</a> (epinephrine and norepinephrine), shuts down digestion, reproductive systems, and boosts metabolism. Vasoconstriction and vasodilation also take place, therefore pumping blood into certain areas of the body and brain that during a normal day&#8217;s activities may not get stimulated very often.  Especially during the fight or flight response, one becomes more attentive, which would seem to help with say, studying for a huge test.</span></p>
<p><span style="color:#000000;"><strong>Are there more effects than just retaining information?</strong></span></p>
<p><span style="color:#000000;">Although cramming may not be ideal for certain people, research needs to continue in terms of stress and cramming, and even learning styles.  Certain people are exposed to more stress than others, so possibly stress levels are compromised, leading to a decreased ability to study and cram the night before a test.  Students continue to cram because results are obtained on tests and finals.  Quite possibly cramming could do more than just get a student a good grade on a test-it could also help to train the body for different stress activities that otherwise may not be achieved.</span></p>
<p><span style="color:#ff0000;"><br />
</span></p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/behavior/'>Behavior</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/health/'>Health</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/medicine/'>Medicine</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/science-culture/'>Science &amp; Culture</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/uncategorized/'>Uncategorized</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1097/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1097/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1097/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1097&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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			<media:title type="html">ljsteele</media:title>
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		<title>Healing a &#8220;Broken&#8221; Heart</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/03/04/healing-a-broken-heart/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/03/04/healing-a-broken-heart/#comments</comments>
		<pubDate>Fri, 04 Mar 2011 15:26:47 +0000</pubDate>
		<dc:creator>Kyle</dc:creator>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[Chemistry]]></category>
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		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1076</guid>
		<description><![CDATA[Irreparable Harm The majority of those reading this have probably experienced some sort of injury in their lifetime.  Injuries such as cuts and broken bones will soon heal with proper care, but there are certain tissues that if damaged, cannot repair themselves. Heart tissue and brain tissue are two examples that come to mind. This [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1076&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><strong>Irreparable Harm</strong></p>
<p>The majority of those reading this have probably experienced some sort of injury in their lifetime.  Injuries such as cuts and broken bones will soon heal with proper care, but there are certain tissues that if damaged, cannot repair themselves. Heart tissue and brain tissue are two examples that come to mind. This may be the case for most of us adult humans, but new research out of <a href="http://www.sciencedaily.com/releases/2011/02/110224145600.htm">The University of Texas Southwestern Medical Center at Dallas</a> is pointing out that some newborn mammals have the ability to heal completely when it comes to heart damage. The only problem is, at some point along the line, as we age, the heart loses this ability to heal itself. Still, this is a very important discovery for a society that suffers greatly from heart disease, which <a href="http://www.cdc.gov/heartdisease/facts.htm">kills thousands of Americans every year</a>.</p>
<p><img class="alignleft" title="Heart" src="http://www.medindia.net/health-images/1-day-Old-Mice-can-Regenerate-Their-Cardiac-Tissues@@heart.jpg" alt="" width="300" height="250" /><strong>Studying a Broken Heart</strong></p>
<p>Researchers found that in newborn mice, when sections of heart were removed, the heart had completely healed within three weeks. The hearts then functioned as normal with no signs of damage. Understanding how this works and why the heart stops doing it after a certain amount of time is now the next step for researchers. Unlike when you tear a hamstring, damage to cardiac tissue after a heart attack doesn’t just heal with time. So for those who suffer from heart problems, a discovery like this brings them one step closer to a healthy heart in the future.</p>
<p><strong>Of Mice &amp; Men</strong></p>
<p><span style="color:#333333;">Obviously mice, <a href="http://www.genome.gov/10005834">which help us a lot more than most people realize</a>, and humans are a little different from each other, but seeing results like this in another mammal is still promising.  If nothing else, it is definitely a huge step in the right direction for researchers looking to cut down on the number of heart related deaths. For now though, it is important for people to remember that they only have one heart, and <a href="http://www.heart.org/HEARTORG/GettingHealthy/GettingHealthy_UCM_001078_SubHomePage.jsp">taking care of it</a> should be a priority. <span style="color:#ff0000;"> </span></span></p>
<p><span style="color:#333333;"><br />
</span></p>
<br />Filed under: <a href='http://marianuniversityscienceblog.wordpress.com/category/biology/'>Biology</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/chemistry/'>Chemistry</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/health/'>Health</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/medicine/'>Medicine</a>, <a href='http://marianuniversityscienceblog.wordpress.com/category/physiology/'>Physiology</a>  <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gocomments/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/comments/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godelicious/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/delicious/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gofacebook/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/facebook/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gotwitter/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/twitter/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/gostumble/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/stumble/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/godigg/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/digg/marianuniversityscienceblog.wordpress.com/1076/" /></a> <a rel="nofollow" href="http://feeds.wordpress.com/1.0/goreddit/marianuniversityscienceblog.wordpress.com/1076/"><img alt="" border="0" src="http://feeds.wordpress.com/1.0/reddit/marianuniversityscienceblog.wordpress.com/1076/" /></a> <img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1076&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></content:encoded>
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		<title>Taking a Radioactive Drag: Polonium 210 and Cigarettes</title>
		<link>http://marianuniversityscienceblog.wordpress.com/2011/03/03/taking-a-radioactive-drag-polonium-210-and-cigarettes/</link>
		<comments>http://marianuniversityscienceblog.wordpress.com/2011/03/03/taking-a-radioactive-drag-polonium-210-and-cigarettes/#comments</comments>
		<pubDate>Thu, 03 Mar 2011 21:33:27 +0000</pubDate>
		<dc:creator>tsublett</dc:creator>
				<category><![CDATA[Chemistry]]></category>
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		<guid isPermaLink="false">http://marianuniversityscienceblog.wordpress.com/?p=1043</guid>
		<description><![CDATA[The Unknown and Known Dangers of Smoking Many of us know the dangers of smoking. We see many friends and loved ones diagnosed with cancer and know of many who die from it each year. We have seen the warning labels on cigarette packages, but what is actually in that smoke? Research says, it’s polonium-210, [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=marianuniversityscienceblog.wordpress.com&amp;blog=11556346&amp;post=1043&amp;subd=marianuniversityscienceblog&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<div id="attachment_1045" class="wp-caption alignleft" style="width: 287px"><a rel="attachment wp-att-1045" href="http://marianuniversityscienceblog.wordpress.com/2011/03/03/taking-a-radioactive-drag-polonium-210-and-cigarettes/radioactive-smoke_1/"><img class="size-full wp-image-1045 " title="Radioactive Smoke" src="http://marianuniversityscienceblog.files.wordpress.com/2011/02/radioactive-smoke_1.jpg?w=460" alt=""   /></a><p class="wp-caption-text">Radioactive Smoke: A Dangerous Isotope Lurks in Cigarettes</p></div>
<p><strong>The Unknown and Known Dangers of Smoking</strong></p>
<p>Many of us know the dangers of smoking. We see many friends and loved ones diagnosed with cancer and know of many who die from it each year. We have seen the warning labels on cigarette packages, but what is actually in that smoke? Research says, it’s <a title="Polonium 210" href="http://en.wikipedia.org/wiki/Polonium_210#210Po">polonium-210</a>, a radioactive isotope found in fertilizers. The problem is, tobacco companies knew about this, a while ago. According to a <a title="Radioactive Smoke: A Dangerous Isotope Lurks in Cigarettes" href="http://www.scientificamerican.com/article.cfm?id=radioactive-smoke">2011 article</a> in Scientific American, “The tobacco industry has known about polonium in cigarettes for nearly 50 years.” Facts like these are disconcerting on many levels.</p>
<div id="attachment_1052" class="wp-caption alignleft" style="width: 310px"><a href="http://marianuniversityscienceblog.files.wordpress.com/2011/02/tobacco-plant.jpg"><img class="size-medium wp-image-1052 " title="Tobacco Plant" src="http://marianuniversityscienceblog.files.wordpress.com/2011/02/tobacco-plant.jpg?w=300&#038;h=225" alt="" width="300" height="225" /></a><p class="wp-caption-text">A Tobacco Plant</p></div>
<p><strong>Ways We Are Exposed to Polonium 210</strong></p>
<p>How exactly this isotope gets into the tobacco leaf is not entirely known, but it is thought to be a “<a title="Decay Products" href="http://en.wikipedia.org/wiki/Daughter_isotope">daughter isotope</a>”<span style="color:#ff0000;"> </span>of uranium 238 found in fertilizers. When the fertilizer is spread on the soil, it begins to decay into either an airborne isotope, such as radon 222, or into lead 210 in the soil. Both of these products enter through the roots or into the leaves and eventually decay into polonium 210. The leaves are then processed normally and eventually end up in cigarettes.</p>
<p><strong>The History of Polonium 210 Detection</strong></p>
<p>Now, then, there seems to be a problem. See, polonium 210 was detected first in the 1960s. This should be a BIG problem, because we are now considering its dangers even though it has been known about  for 50+ years! Through a series of papers published during the 1960s, namely <a title="Polonium-210: A Volatile Radioelement in Cigarettes" href="http://www.jstor.org/stable/pdfplus/1712451.pdf?acceptTC=true">a paper</a> published in 1964 by Radford and Hunt, scientists demonstrated how polonium 210 can enter the soil.  Subsequently in <a title="Respiratory Tract Tumors in Hamsters Induced by Benzo(a)pyrene and 210Po α-Radiation1" href="http://cancerres.aacrjournals.org/content/34/11/3026.full.pdf+html">a paper</a> published in 1974, by John B. Little and William O&#8217;Toole, proved that smokers can develop “hot-spots” on their lungs where polonium 210 accumulates. The hot spots can cause mutations due to <a title="Alpha Decay" href="http://en.wikipedia.org/wiki/Alpha_decay">alpha decay </a>. The problem is, tobacco farmers and cigarette manufacturers are not removing this isotope. The good news is&#8230; they may start doing so soon.</p>
<p><strong>How much polonium do we get when we smoke?<br />
</strong></p>
<p>Here is an excerpt from a <a title="Puffing on Polonium" href="http://www.nytimes.com/2006/12/01/opinion/01proctor.html?_r=1">New York Times article</a>:</p>
<blockquote>
<p style="text-align:left;">A fraction of a trillionth of a curie (a unit of radiation named for polonium’s discoverers, Marie and Pierre <a title="Pierre and Marie Curie" href="http://nobelprize.org/nobel_prizes/physics/articles/curie/">Curie</a>) may not sound like much, but remember that we’re talking about a powerful radionuclide disgorging alpha particles — the most dangerous kind when it comes to lung cancer — at a much higher rate even than the plutonium used in the bomb dropped on Nagasaki. Polonium 210 has a half life of about 138 days, making it thousands of times more radioactive than the nuclear fuels used in early atomic bombs.</p>
<p style="text-align:left;">We should also recall that people smoke a lot of cigarettes — about 5.7 trillion worldwide every year, enough to make a continuous chain from the earth to the sun and back, with enough left over for a few side-trips to Mars. If .04 picocuries of polonium are inhaled with every cigarette, about a quarter of a curie of one of the world’s most radioactive poisons is inhaled along with the tar, nicotine and cyanide of all the world’s cigarettes smoked each year. Pack-and-a-half smokers are dosed to the tune of about 300 chest X-rays.</p>
</blockquote>
<p style="text-align:left;">&nbsp;</p>
<p style="text-align:left;"><strong>Is there any relief?<br />
</strong></p>
<p style="text-align:left;">Maybe we should stop smoking, it&#8217;s likely the best approach. If you can&#8217;t quite kick the habit, the <a title="FDA website" href="http://www.fda.gov/">FDA</a> may help. Recently the FDA has taken over the regulation of cigarettes in the wake of the <a title="Family Smoking and Tobacco Control Act" href="http://www.govtrack.us/congress/bill.xpd?bill=h111-1256">Family Smoking and Tobacco Control Act </a> passed in 2009. With the FDA&#8217;s help, the exact content of polonium 210 in cigarettes may soon be published. On a side note, one quick fix may come in tobacco leaf preparation. Simply washing the leaves after harvest may eliminate a large portion of the polonium 210 found in the air.</p>
<p style="text-align:left;">&nbsp;</p>
<p><strong>The Largest Preventable Cause of Death in the World.</strong></p>
<p style="text-align:left;">It seems like a radioactive isotope found in smoke is just one of many carcinogens that continue to contribute to tobacco being the largest preventable cause of death in the world. According to Scientific American:</p>
<blockquote>
<p style="text-align:left;"><a title="The World Health Organization" href="http://www.who.int/en/">The World Heath Organization</a><span style="color:#ff0000;"> </span>has made clear that smoking is the most avoidable cause of <a title="Top 10 causes of death" href="http://www.who.int/mediacentre/factsheets/fs310/en/index4.html">death</a>. It estimates that 1.3 million people die of lung cancer worldwide every year, 90 percent because of smoking. If polonium has been reduced through methods known to the industry, many thousands of those deaths could have been avoided. The industry, many thousands of those deaths could have been avoided. The industry&#8217;s lawyers made the conscious choice not to act on the results of their own scientists&#8217; investigations. But it is the customers who have had to live with-and die from- that decision.</p>
</blockquote>
<p>So, cigarettes are bad, but how bad they may be for us is still up in the air. Perhaps we can make them a little less dangerous in the future by removing these dangerous isotopes. Hopefully, with the FDA regulating cigarettes, this dangerous vice will soon be put to rest.</p>
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